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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3788473_3788580_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3788473 - 3788580

Intron Length:

108

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTTGT

5'SS Class:

strong_major

3'SS Sequence:

ATCTCTCCTGAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CAATAAT

U12 Branch Point Sequence:

TCTCTCCTGAAG

Flanking Amino Acid:

AVGVVAFGCTVQQSSFYGYT

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.9

80.5

Major BPS

67.7

0.44

1.1

67.9

34.4

Major PPT

68.5

0.42

68.6

31.4

Minor 5ss

-0.2

2.5

67.3

43.8

Minor BPS

46.2

-0.4

1.8

53.55

41.2

Associated Gene:

Gene:

SLC29A4

Ensembl Gene ID:

ENSAPLG00000010012

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035930

3785672 - 3789497

3826

ENSAPLT00000010425

3785672 - 3789777

4106