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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3805421_3806678_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3805421 - 3806678

Intron Length:

1258

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTCCG

5'SS Class:

strong_major

3'SS Sequence:

CTCTGCTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTAAC

U12 Branch Point Sequence:

TCCAGCTAACCT

Flanking Amino Acid:

GGECTLMKQHKLDGSMEPAN

Intron Amino Acid Position:

347

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

69.1

41.8

Major BPS

60.6

0.26

1.1

61.4

34.2

Major PPT

68.1

0.41

36.3

Minor 5ss

36.2

-1.6

2.9

43.1

37.6

Minor BPS

42.6

-0.4

2.3

59.56

49.6

Associated Gene:

Gene:

WIPI2

Ensembl Gene ID:

ENSAPLG00000009715

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010147

3804350 - 3822649

18300