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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3860228_3863921_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3860228 - 3863921

Intron Length:

3694

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GTG|GCCGCGCTG

5'SS Class:

weak_major

3'SS Sequence:

TGCCCCCACCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTACAA

U12 Branch Point Sequence:

TGGGCTACAACC

Flanking Amino Acid:

LQVGEGGGKLWQRDGKQLQQ

Intron Amino Acid Position:

210

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.5

0.04

1.3

46.8

41.5

Major BPS

47.3

-0.1

1.2

54.9

40.8

Major PPT

63.7

0.31

0.9

54.5

35.5

Minor 5ss

23.7

-3

4.2

34.9

43.6

Minor BPS

45.9

-0.3

1.9

56.13

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026450

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030746

3857754 - 3864129

6376