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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3866050_3866319_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3866050 - 3866319

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCA

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTTCTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGAAGAT

U12 Branch Point Sequence:

GCCAGCTGAAGT

Flanking Amino Acid:

LAARSQDLIPRVSLFLAKMR

Intron Amino Acid Position:

719

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.82

0.9

71.8

33.2

Major BPS

52.3

0.06

1.3

49.1

44.8

Major PPT

88.7

0.87

0.6

84.5

23.3

Minor 5ss

24.1

-3

3.2

29.7

43.3

Minor BPS

42.3

-0.5

2.1

53.88

47.1

Associated Gene:

Gene:

AP5Z1

Ensembl Gene ID:

ENSAPLG00000009165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037734

3865779 - 3874483

8705

ENSAPLT00000009575

3865779 - 3874350

8572