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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3870608_3870927_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3870608 - 3870927

Intron Length:

320

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGAGCT

5'SS Class:

strong_major

3'SS Sequence:

GTTTTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACCTCAT

U12 Branch Point Sequence:

TATGTGGTAACG

Flanking Amino Acid:

GGKGLNAPSSGSRSEMDKSV

Intron Amino Acid Position:

264

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

72.7

36.9

Major BPS

73.5

0.58

73.6

32.5

Major PPT

85.4

0.8

0.7

81.6

30.4

Minor 5ss

-2.1

3.6

48.4

47.3

Minor BPS

42.8

-0.6

2.6

55.35

46.1

Associated Gene:

Gene:

AP5Z1

Ensembl Gene ID:

ENSAPLG00000009165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037734

3865779 - 3874483

8705

ENSAPLT00000009575

3865779 - 3874350

8572