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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3871097_3871268_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3871097 - 3871268

Intron Length:

172

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCTCCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTAAC

U12 Branch Point Sequence:

TGGGTCTAACCT

Flanking Amino Acid:

GFFSNPRTRQPGPVTEVDGA

Intron Amino Acid Position:

208

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

1.2

85.2

32.2

Major BPS

66.8

0.42

1.2

69.6

35.5

Major PPT

83.5

0.75

0.7

76.2

32.4

Minor 5ss

-1.8

3.3

49.7

46.6

Minor BPS

46.2

-0.2

63.34

47.1

Associated Gene:

Gene:

AP5Z1

Ensembl Gene ID:

ENSAPLG00000009165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037734

3865779 - 3874483

8705

ENSAPLT00000009575

3865779 - 3874350

8572