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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3872298_3873488_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3872298 - 3873488

Intron Length:

1191

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAATGAC

5'SS Class:

strong_major

3'SS Sequence:

CTTTACTTTGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTAGAT

U12 Branch Point Sequence:

CTACCTTTACCT

Flanking Amino Acid:

SLVSSVLLAQGDKAEVAAVG

Intron Amino Acid Position:

123

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

29.5

Major BPS

61.4

0.28

1.3

60.7

45.9

Major PPT

74.9

0.56

75.4

Minor 5ss

32.3

-2

3.3

42.9

44.7

Minor BPS

59.6

0.38

1.7

73.91

Associated Gene:

Gene:

AP5Z1

Ensembl Gene ID:

ENSAPLG00000009165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009575

3865779 - 3874350

8572

ENSAPLT00000037734

3865779 - 3874483

8705