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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3874188_3874309_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3874188 - 3874309

Intron Length:

122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACCGGCG

5'SS Class:

weak_major

3'SS Sequence:

TCTCCCCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTAAC

U12 Branch Point Sequence:

TCGGCCCTAACC

Flanking Amino Acid:

AAAESFLRQAREAQPEELQR

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.3

44.1

42.7

Major BPS

59.7

0.24

1.1

61.2

32.6

Major PPT

75.5

0.57

0.7

69.5

24.3

Minor 5ss

34.5

-1.8

3.7

47.3

48.2

Minor BPS

57.6

0.22

1.9

66.79

Associated Gene:

Gene:

AP5Z1

Ensembl Gene ID:

ENSAPLG00000009165

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009575

3865779 - 3874350

8572