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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3892553_3894318_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3892553 - 3894318

Intron Length:

1766

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTGCTTCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

AAATAATCATCT

Flanking Amino Acid:

YYRTADKGWQNSIRHNLSLN

Intron Amino Acid Position:

329

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

80.4

0.76

80.3

31.8

Major PPT

79.1

0.65

0.8

73.3

31.7

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

42.4

-0.5

59.87

42.4

Associated Gene:

Gene:

FOXK1

Ensembl Gene ID:

ENSAPLG00000009084

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000009458

3885547 - 3931177

45631