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Intron Name: Anas_platyrhynchos_platyrhynchos_15_39271_48496_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

39271 - 48496

Intron Length:

9226

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TGGTCTAATTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

ACTGACAAAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

98.2

1.14

0.6

93.2

14.5

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

66.1

0.36

63.9

41.8

Minor 5ss

43.8

-0.7

2.8

58.1

46.5

Minor BPS

44.5

-0.3

2.1

64.03

45.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015598

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016249

32314 - 48524

16211