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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3959378_3959891_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3959378 - 3959891

Intron Length:

514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGAGCA

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCCCTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTAACAC

U12 Branch Point Sequence:

CTGAGGTTAACA

Flanking Amino Acid:

ECYSTFTNRRHMDLAGVLNN

Intron Amino Acid Position:

107

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.7

36.4

Major BPS

61.1

0.28

1.1

69.4

35.9

Major PPT

0.81

0.7

77.8

Minor 5ss

30.3

-2.3

3.2

31.5

42.2

Minor BPS

45.8

-0.3

2.4

59.37

46.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007867

3955027 - 3966425

11399