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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3960366_3961388_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3960366 - 3961388

Intron Length:

1023

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGTAGC

5'SS Class:

major

3'SS Sequence:

CATCTTTTCTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

AAATATTTAATC

Flanking Amino Acid:

VEKDSSIPVKDIFGSYSMDV

Intron Amino Acid Position:

174

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

1.1

69.9

41.1

Major BPS

90.7

1.01

0.7

19.9

Major PPT

81.9

0.72

0.8

80.1

31.5

Minor 5ss

37.4

-1.4

2.7

42.4

38.3

Minor BPS

60.2

0.3

1.4

63.98

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007867

3955027 - 3966425

11399