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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3961538_3962533_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3961538 - 3962533

Intron Length:

996

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTAAATCAC

5'SS Class:

major

3'SS Sequence:

ATTTGTTTTTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCAA

U12 Branch Point Sequence:

TTTACATTATTC

Flanking Amino Acid:

DFFDPVFIVSFVFPFICPLL

Intron Amino Acid Position:

224

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

67.7

37.5

Major BPS

90.8

1.01

0.7

91.9

19.6

Major PPT

87.6

0.84

0.8

85.1

34.9

Minor 5ss

36.3

-1.6

3.1

48.6

40.9

Minor BPS

56.4

0.18

1.9

72.48

38.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007867

3955027 - 3966425

11399