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Intron Name: Anas_platyrhynchos_platyrhynchos_15_3963897_3964319_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3963897 - 3964319

Intron Length:

423

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGGGA

5'SS Class:

strong_major

3'SS Sequence:

CTGTTGTCCGAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTGAC

U12 Branch Point Sequence:

CATACCTGACCA

Flanking Amino Acid:

EEIDNAFPNKAPLTYETVMQ

Intron Amino Acid Position:

349

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.1

38.2

Major BPS

60.1

0.25

35.6

Major PPT

62.9

0.29

1.1

63.6

37.2

Minor 5ss

28.6

-2.5

3.5

46.8

Minor BPS

50.1

-0

1.8

62.37

43.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007867

3955027 - 3966425

11399