Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_3964547_3965361_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3964547 - 3965361

Intron Length:

815

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAAAAT

5'SS Class:

major

3'SS Sequence:

CGTCATTATCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTTTCCCCAACA

Flanking Amino Acid:

WPNPDEFRPERFSKENKDSI

Intron Amino Acid Position:

424

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

74.2

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

0.47

61.9

43.3

Minor 5ss

33.4

-1.9

3.3

48.6

47.1

Minor BPS

68.3

0.57

1.9

84.96

34.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000007447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000007867

3955027 - 3966425

11399