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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4017228_4023558_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4017228 - 4023558

Intron Length:

6331

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGTT

5'SS Class:

strong_major

3'SS Sequence:

CCTGCTGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

AATGGCTGATTT

Flanking Amino Acid:

EKPLEVSESEATDSDYEDEL

Intron Amino Acid Position:

1936

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.2

0.9

0.8

88.1

25.2

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

71.1

0.47

0.9

61.1

40.1

Minor 5ss

40.3

-1.1

3.4

58.5

40.4

Minor BPS

43.3

-0.4

2.1

60.19

43.6

Associated Gene:

Gene:

SDK1

Ensembl Gene ID:

ENSAPLG00000004608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004908

4016955 - 4400094

383140