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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4024039_4026031_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4024039 - 4026031

Intron Length:

1993

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGACAT

5'SS Class:

strong_major

3'SS Sequence:

TGCCTGGCTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACCCAT

U12 Branch Point Sequence:

TTCAGCTGAATT

Flanking Amino Acid:

QSKKYKNCSTGKTISNVEES

Intron Amino Acid Position:

1852

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.1

0.97

0.8

80.7

33.7

Major BPS

64.5

0.36

1.2

72.7

34.4

Major PPT

67.7

0.4

57.4

43.3

Minor 5ss

33.6

-1.9

3.2

47.4

Minor BPS

52.7

0.16

1.9

73.39

43.7

Associated Gene:

Gene:

SDK1

Ensembl Gene ID:

ENSAPLG00000004608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004908

4016955 - 4400094

383140