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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4028888_4036645_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4028888 - 4036645

Intron Length:

7758

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCCAT

5'SS Class:

strong_major

3'SS Sequence:

GCCGCTTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTTAAT

U12 Branch Point Sequence:

TGTTCCTCACCT

Flanking Amino Acid:

TGYIIEARPSDEGLWDMFVK

Intron Amino Acid Position:

1751

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

77.9

38.6

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

74.1

0.54

0.9

64.4

41.5

Minor 5ss

39.5

-1.2

3.2

55.8

48.4

Minor BPS

65.9

0.58

1.9

85.32

40.8

Associated Gene:

Gene:

SDK1

Ensembl Gene ID:

ENSAPLG00000004608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004908

4016955 - 4400094

383140