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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4040878_4041832_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4040878 - 4041832

Intron Length:

955

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGGGAT

5'SS Class:

major

3'SS Sequence:

GTAATCCTTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATATTTGTAATC

Flanking Amino Acid:

SPSQGRTHQAAPSAPSFLAF

Intron Amino Acid Position:

1609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

67.5

37.5

Major BPS

84.4

0.85

1.1

34.5

Major PPT

74.8

0.56

70.3

40.9

Minor 5ss

37.1

-1.5

3.6

51.3

47.8

Minor BPS

51.6

0.03

1.9

64.51

35.6

Associated Gene:

Gene:

SDK1

Ensembl Gene ID:

ENSAPLG00000004608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004908

4016955 - 4400094

383140