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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4109919_4112993_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4109919 - 4112993

Intron Length:

3075

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTGAGTAGT

5'SS Class:

major

3'SS Sequence:

TTCTGATTGCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAT

U12 Branch Point Sequence:

CTCCTGTTAACA

Flanking Amino Acid:

TPQLLRTLEDKPGAVGHLSF

Intron Amino Acid Position:

923

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

71.9

39.5

Major BPS

91.3

1.03

0.7

79.6

35.6

Major PPT

72.3

0.5

1.1

65.7

44.5

Minor 5ss

34.2

-1.8

2.9

41.7

Minor BPS

0.03

2.1

63.68

43.1

Associated Gene:

Gene:

SDK1

Ensembl Gene ID:

ENSAPLG00000004608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004908

4016955 - 4400094

383140