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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4113187_4116278_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4113187 - 4116278

Intron Length:

3092

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAGG

5'SS Class:

strong_major

3'SS Sequence:

TTAAATTTTCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTATGTTTAAAT

Flanking Amino Acid:

FINGINQGYKLLAWPVDAPE

Intron Amino Acid Position:

859

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.4

0.83

0.9

75.1

41.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

74.6

0.55

0.9

66.4

44.5

Minor 5ss

34.5

-1.8

2.8

42.5

44.3

Minor BPS

63.7

0.51

1.8

81.97

39.4

Associated Gene:

Gene:

SDK1

Ensembl Gene ID:

ENSAPLG00000004608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004908

4016955 - 4400094

383140