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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4146158_4148269_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4146158 - 4148269

Intron Length:

2112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGA|GTAAGGACA

5'SS Class:

major

3'SS Sequence:

GTGTTCCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTCACCTGAACT

Flanking Amino Acid:

LNAFVTLTVWNRTFIVHPPE

Intron Amino Acid Position:

524

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.1

39.6

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

81.1

0.7

0.9

77.7

36.7

Minor 5ss

33.8

-1.8

3.1

37.6

40.8

Minor BPS

72.6

0.79

1.5

85.98

39.7

Associated Gene:

Gene:

SDK1

Ensembl Gene ID:

ENSAPLG00000004608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004908

4016955 - 4400094

383140