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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4220129_4281248_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4220129 - 4281248

Intron Length:

61120

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTAAGTCAA

5'SS Class:

strong_major

3'SS Sequence:

CTTTCCTAAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAC

U12 Branch Point Sequence:

CTTTCCTAAACA

Flanking Amino Acid:

DGHKIIPSSRIAITLENQLV

Intron Amino Acid Position:

190

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

76.2

34.7

Major BPS

74.2

0.6

39.4

Major PPT

73.9

0.54

0.9

70.1

34.1

Minor 5ss

-1.6

45.7

42.5

Minor BPS

75.1

0.78

1.6

83.03

38.2

Associated Gene:

Gene:

SDK1

Ensembl Gene ID:

ENSAPLG00000004608

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004908

4016955 - 4400094

383140