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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4486124_4486749_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4486124 - 4486749

Intron Length:

626

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCAAACATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTCAA

U12 Branch Point Sequence:

AGTTGATAAACT

Flanking Amino Acid:

EPTRRFSTIVVEEGHEGLTH

Intron Amino Acid Position:

144

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

0.8

81.1

26.8

Major BPS

75.6

0.64

1.1

77.7

37.1

Major PPT

68.2

0.41

63.1

42.3

Minor 5ss

29.7

-2.3

2.6

30.1

36.9

Minor BPS

-0

2.3

72.4

44.1

Associated Gene:

Gene:

CARD11

Ensembl Gene ID:

ENSAPLG00000003700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038287

4463730 - 4507255

43526

ENSAPLT00000003869

4484670 - 4506824

22155