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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4487076_4488345_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4487076 - 4488345

Intron Length:

1270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGAA

5'SS Class:

strong_major

3'SS Sequence:

CTGGCTGTTCTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

CTCCTTTTCACT

Flanking Amino Acid:

VIRSRDLQLEIDQLKHRLNK

Intron Amino Acid Position:

253

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.8

76.5

26.8

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

66.7

0.38

57.7

43.2

Minor 5ss

24.3

-3

3.1

28.7

43.6

Minor BPS

50.7

0.1

1.8

67.89

43.7

Associated Gene:

Gene:

CARD11

Ensembl Gene ID:

ENSAPLG00000003700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038287

4463730 - 4507255

43526

ENSAPLT00000003869

4484670 - 4506824

22155