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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4493067_4494278_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4493067 - 4494278

Intron Length:

1212

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGAAAG

5'SS Class:

major

3'SS Sequence:

TCTGTAAGCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTCAT

U12 Branch Point Sequence:

TCATCTGTAAGC

Flanking Amino Acid:

VGMKTTSEFQAVRAQDEDGA

Intron Amino Acid Position:

550

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.5

0.63

1.3

71.6

40.1

Major BPS

72.5

0.56

1.2

39.9

Major PPT

64.7

0.33

58.8

40.8

Minor 5ss

28.2

-2.5

2.7

31.3

42.4

Minor BPS

48.4

-0.1

2.2

62.27

43.7

Associated Gene:

Gene:

CARD11

Ensembl Gene ID:

ENSAPLG00000003700

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003869

4484670 - 4506824

22155

ENSAPLT00000038287

4463730 - 4507255

43526