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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4604153_4605194_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4604153 - 4605194

Intron Length:

1042

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTGCA

5'SS Class:

strong_major

3'SS Sequence:

GTCTTGCTTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGGAT

U12 Branch Point Sequence:

CTTCTTTGGATT

Flanking Amino Acid:

FLTSLIKSMRDQDEFKESLL

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.5

0.88

0.9

76.8

31.8

Major BPS

71.4

0.53

1.4

71.4

45.1

Major PPT

79.5

0.66

0.9

72.9

37.4

Minor 5ss

39.1

-1.2

50.2

46.2

Minor BPS

49.9

0.07

1.4

37.4

Associated Gene:

Gene:

BRAT1

Ensembl Gene ID:

ENSAPLG00000003300

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003374

4603029 - 4610612

7584