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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4606860_4607349_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4606860 - 4607349

Intron Length:

490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAATGTTT

5'SS Class:

major

3'SS Sequence:

CCCTTTCCATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GAAATAT

U12 Branch Point Sequence:

TTTGCTGGAAAC

Flanking Amino Acid:

LAHLEKLLSLIHLPVDLPYT

Intron Amino Acid Position:

250

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.7

0.58

74.1

36.8

Major BPS

46.8

-0.2

1.2

41.4

39.4

Major PPT

70.4

0.46

0.8

70.4

29.1

Minor 5ss

42.9

-0.8

3.4

61.4

45.4

Minor BPS

45.8

-0.3

2.2

64.08

41.6

Associated Gene:

Gene:

BRAT1

Ensembl Gene ID:

ENSAPLG00000003300

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003374

4603029 - 4610612

7584