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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4607827_4608962_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4607827 - 4608962

Intron Length:

1136

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAGGAGTT

5'SS Class:

major

3'SS Sequence:

TTCCTCCTTGAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

TCCTCCTTGAAG

Flanking Amino Acid:

LAVGILSLHKCPQDVRIQAM

Intron Amino Acid Position:

179

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

71.6

38.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

74.4

0.55

75.3

27.2

Minor 5ss

35.1

-1.7

3.8

52.1

46.1

Minor BPS

63.6

0.28

1.6

63.5

44.6

Associated Gene:

Gene:

BRAT1

Ensembl Gene ID:

ENSAPLG00000003300

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003374

4603029 - 4610612

7584