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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4625611_4627927_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4625611 - 4627927

Intron Length:

2317

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACAGAAA

5'SS Class:

major

3'SS Sequence:

TTCTTCTTCTCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTAAT

U12 Branch Point Sequence:

TAATCTTTAGGG

Flanking Amino Acid:

TEDTMEKLNKSSPVCTVKGE

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.1

68.4

38.1

Major BPS

77.9

0.69

0.8

75.9

Major PPT

88.6

0.87

0.6

21.9

Minor 5ss

29.9

-2.3

3.3

39.1

46.3

Minor BPS

49.8

-0.1

1.9

57.27

44.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003199

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003272

4611986 - 4635818

23833