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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4645044_4682757_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4645044 - 4682757

Intron Length:

37714

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCC

5'SS Class:

strong_major

3'SS Sequence:

TTCTTTTCCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTGAC

U12 Branch Point Sequence:

TTTTCTTTTCCT

Flanking Amino Acid:

FRPQDAEYQQALLLLGGVAL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.9

33.4

Major BPS

66.3

0.4

1.1

41.8

Major PPT

88.4

0.86

0.6

88.2

21.6

Minor 5ss

-2.9

3.3

32.7

42.5

Minor BPS

48.1

-0

3.6

87.77

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040774

4644921 - 4711109

66189

ENSAPLT00000032446

4644921 - 4711109

66189

ENSAPLT00000020985

4644921 - 4712199

67279