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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4693350_4695933_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4693350 - 4695933

Intron Length:

2584

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTCCT

5'SS Class:

strong_major

3'SS Sequence:

CTGTCTCCTACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTACAT

U12 Branch Point Sequence:

GCTTCTACATCT

Flanking Amino Acid:

LIRNSRAILLGVCLLGVFAL

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.7

0.84

75.3

40.8

Major BPS

70.2

0.5

1.1

77.2

Major PPT

79.3

0.66

0.8

72.8

32.1

Minor 5ss

36.4

-1.5

2.9

43.6

43.3

Minor BPS

45.8

-0.2

65.81

44.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017182

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040774

4644921 - 4711109

66189

ENSAPLT00000020985

4644921 - 4712199

67279