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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_481466_482752_R

Intron Information:

Intron Rank:
11
Intron Class:
major
Intron Phase:
0
Intron Coordinates:
481466 - 482752
Intron Length:
1287

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTAGGGGCA
5'SS Class:
major
3'SS Sequence:
CTGCCTCTTGTAG|C
3'SS Class:
major_PPT
U2 Branch Point Sequence:
AACTAAT
U12 Branch Point Sequence:
AAACTAATACCT
Flanking Amino Acid:
CFQLYTKEEQLAPDDAWRCP
Intron Amino Acid Position:
458

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.4
0.69
1
66.7
39.1
Major BPS
77.9
0.69
0.8
75.9
25
Major PPT
74.7
0.56
0.8
69.4
31.3
Minor 5ss
28.1
-2.5
3.6
38.3
46.9
Minor BPS
41.1
-0.6
1.9
56.29
39

Associated Gene:

Gene:
USP31
Ensembl Gene ID:
ENSAPLG00000014939
Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015576
471367 - 497535
26169