Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_4832618_4833120_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4832618 - 4833120

Intron Length:

503

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTCCA

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGTTACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

CCCTCTTTATTT

Flanking Amino Acid:

QVPVDVVEMKESIIAFAWEP

Intron Amino Acid Position:

569

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

73.5

37.2

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

0.81

0.9

80.4

36.6

Minor 5ss

34.6

-1.8

2.8

42.9

43.8

Minor BPS

56.2

0.27

1.6

66.47

45.5

Associated Gene:

Gene:

EIF3B

Ensembl Gene ID:

ENSAPLG00000016062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033447

4826547 - 4843803

17257

ENSAPLT00000016780

4828213 - 4843803

15591