Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_4835387_4835480_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4835387 - 4835480

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAGGTTGC

5'SS Class:

major

3'SS Sequence:

TGTATTTGCTTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TAATTCCTATCT

Flanking Amino Acid:

CENSAHWPIFKWSHDGKFFA

Intron Amino Acid Position:

436

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.9

Major BPS

85.7

0.89

0.8

22.2

Major PPT

70.2

0.45

69.5

41.5

Minor 5ss

40.9

-1

3.1

51.9

39.6

Minor BPS

53.3

0.18

1.9

74.7

41.6

Associated Gene:

Gene:

EIF3B

Ensembl Gene ID:

ENSAPLG00000016062

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033447

4826547 - 4843803

17257

ENSAPLT00000016780

4828213 - 4843803

15591