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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_484366_484519_R

Intron Information:

Intron Rank:
7
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
484366 - 484519
Intron Length:
154

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
AAG|GTGACTGGC
5'SS Class:
major
3'SS Sequence:
CTCCTTTCTCTAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTCTGAT
U12 Branch Point Sequence:
TCTTCCTCAAAT
Flanking Amino Acid:
NRACTGQQSKRFGLPFVLHL
Intron Amino Acid Position:
319

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
76.4
0.62
1.1
66.6
39.6
Major BPS
91.3
1.03
0.7
79.6
35.6
Major PPT
79.7
0.67
0.7
72.8
32
Minor 5ss
33.1
-1.9
3.2
43.9
43.9
Minor BPS
70.9
0.73
1.6
85.81
40.1

Associated Gene:

Gene:
USP31
Ensembl Gene ID:
ENSAPLG00000014939
Chromosome:
15

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015576
471367 - 497535
26169