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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4848182_4855874_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4848182 - 4855874

Intron Length:

7693

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACGGGGG

5'SS Class:

major

3'SS Sequence:

TTTTGTCTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGCAG

U12 Branch Point Sequence:

GTCTACTGGACT

Flanking Amino Acid:

GEPPAGTAATDLAKPPVNEP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.1

58.9

Major BPS

51.1

0.03

1.8

71.4

45.1

Major PPT

86.8

0.83

0.7

85.5

29.2

Minor 5ss

27.5

-2.6

3.6

37.8

Minor BPS

56.1

0.27

1.8

74.06

42.4

Associated Gene:

Gene:

SNX8

Ensembl Gene ID:

ENSAPLG00000015927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016627

4848145 - 4867646

19502