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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4861007_4861373_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4861007 - 4861373

Intron Length:

367

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTGAGTACT

5'SS Class:

major

3'SS Sequence:

CTCTCTTCTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTGAT

U12 Branch Point Sequence:

GCTCATTTGATT

Flanking Amino Acid:

LKLFLSFSGSDVQNKLRELV

Intron Amino Acid Position:

157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

74.6

35.3

Major BPS

87.6

0.93

0.8

77.4

37.3

Major PPT

81.8

0.72

0.7

80.8

24.5

Minor 5ss

35.1

-1.7

2.8

49.5

40.3

Minor BPS

51.4

0.12

1.5

65.88

Associated Gene:

Gene:

SNX8

Ensembl Gene ID:

ENSAPLG00000015927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047911

4848878 - 4867646

18769

ENSAPLT00000016627

4848145 - 4867646

19502