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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4861455_4862421_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4861455 - 4862421

Intron Length:

967

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTACGTATA

5'SS Class:

strong_major

3'SS Sequence:

TGCACTTCTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

ATCTCTTGCACT

Flanking Amino Acid:

MTCRLATQAKDFLPADIQAQ

Intron Amino Acid Position:

184

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.3

0.93

0.9

87.3

29.4

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

76.6

0.6

0.9

73.2

37.1

Minor 5ss

38.2

-1.3

45.5

Minor BPS

54.1

0.21

1.9

74.82

42.2

Associated Gene:

Gene:

SNX8

Ensembl Gene ID:

ENSAPLG00000015927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047911

4848878 - 4867646

18769

ENSAPLT00000016627

4848145 - 4867646

19502