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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4865799_4866532_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4865799 - 4866532

Intron Length:

734

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTCCCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTTT

U12 Branch Point Sequence:

TTTTTTCCCACA

Flanking Amino Acid:

VNSQIQGHKEMSKVWNELKP

Intron Amino Acid Position:

405

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

23.3

Major BPS

38.1

-0.7

4.3

71.7

44.6

Major PPT

88.7

0.87

0.6

84.5

23.5

Minor 5ss

37.4

-1.4

2.9

50.4

Minor BPS

45.8

-0.3

2.2

67.52

39.2

Associated Gene:

Gene:

SNX8

Ensembl Gene ID:

ENSAPLG00000015927

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047911

4848878 - 4867646

18769

ENSAPLT00000016627

4848145 - 4867646

19502