Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_15_487517_488631_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

487517 - 488631

Intron Length:

1115

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGATGT

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTGTAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAT

U12 Branch Point Sequence:

TGATGTGTAACT

Flanking Amino Acid:

FVQELFQAQYRSSLTCPHCQ

Intron Amino Acid Position:

133

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

74.2

37.1

Major BPS

79.1

0.72

69.3

38.4

Major PPT

67.1

0.38

1.1

61.3

43.6

Minor 5ss

45.8

-0.4

2.9

65.2

Minor BPS

48.9

-0

2.4

73.14

43.8

Associated Gene:

Gene:

USP31

Ensembl Gene ID:

ENSAPLG00000014939

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015576

471367 - 497535

26169