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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4885946_4887175_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4885946 - 4887175

Intron Length:

1230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATCAT

U12 Branch Point Sequence:

CTCTTGTCATCT

Flanking Amino Acid:

LLAEYEQKIKDLEQKFSQQE

Intron Amino Acid Position:

227

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

80.4

0.76

80.3

31.8

Major PPT

81.7

0.71

0.9

41.6

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

43.1

-0.4

2.4

62.9

47.5

Associated Gene:

Gene:

MAD1L1

Ensembl Gene ID:

ENSAPLG00000015788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016488

4881238 - 5228903

347666