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Intron Name: Anas_platyrhynchos_platyrhynchos_15_4927_6354_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

4927 - 6354

Intron Length:

1428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAATATT

5'SS Class:

strong_major

3'SS Sequence:

GTAACCTGTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTTAT

U12 Branch Point Sequence:

TTCATTGTAACC

Flanking Amino Acid:

KAKDLVEKLLVLDATKRLGC

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

29.7

Major BPS

79.9

0.74

0.9

69.7

37.1

Major PPT

66.1

0.36

1.1

62.1

Minor 5ss

41.2

-1

56.7

Minor BPS

50.4

-0

65.81

40.5

Associated Gene:

Gene:

PDPK1

Ensembl Gene ID:

ENSAPLG00000015673

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048498

890 - 25429

24540

ENSAPLT00000016388

890 - 25912

25023