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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5075922_5107818_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5075922 - 5107818

Intron Length:

31897

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGAAAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTGCCATGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TACTCAG

U12 Branch Point Sequence:

AGTTACTCAGTT

Flanking Amino Acid:

EMKLEKLTLQGDYDPSKTKV

Intron Amino Acid Position:

533

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.8

0.9

80.7

33.7

Major BPS

63.2

0.33

1.5

71.6

36.4

Major PPT

75.9

0.58

0.9

70.1

35.5

Minor 5ss

33.7

-1.9

3.3

47.7

Minor BPS

48.4

-0

1.9

41.6

Associated Gene:

Gene:

MAD1L1

Ensembl Gene ID:

ENSAPLG00000015788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016488

4881238 - 5228903

347666