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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5384832_5385617_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5384832 - 5385617

Intron Length:

786

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCACG

5'SS Class:

strong_major

3'SS Sequence:

CTTGCCTTGCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTGAT

U12 Branch Point Sequence:

CCCTGCTGATCG

Flanking Amino Acid:

YFDSVRDCYEAFVIYSFLSL

Intron Amino Acid Position:

131

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.5

0.81

0.9

71.4

40.3

Major BPS

76.2

0.65

1.1

65.3

43.7

Major PPT

72.1

0.5

65.2

41.1

Minor 5ss

34.3

-1.8

2.8

40.4

45.5

Minor BPS

42.1

-0.7

2.1

43.24

48.1

Associated Gene:

Gene:

TMEM184A

Ensembl Gene ID:

ENSAPLG00000015550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016219

5384018 - 5388272

4255