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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5385879_5386439_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5385879 - 5386439

Intron Length:

561

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGGGTACC

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGTGCAT

U12 Branch Point Sequence:

ATGGCCCTGAGT

Flanking Amino Acid:

SIGFLRFCKQATLQFCIVKP

Intron Amino Acid Position:

187

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.4

0.76

0.9

74.9

35.3

Major BPS

0.03

1.5

63.1

44.4

Major PPT

73.6

0.53

0.9

68.2

31.9

Minor 5ss

30.2

-2.3

2.9

36.9

40.4

Minor BPS

46.9

-0.1

2.1

65.85

44.9

Associated Gene:

Gene:

TMEM184A

Ensembl Gene ID:

ENSAPLG00000015550

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016219

5384018 - 5388272

4255