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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5396276_5397174_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5396276 - 5397174

Intron Length:

899

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGGGAG

5'SS Class:

major

3'SS Sequence:

TTGGTGTTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCTAC

U12 Branch Point Sequence:

CCGCTGCTACCC

Flanking Amino Acid:

TNPKPNKALKVKEESGENAP

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.68

63.9

42.4

Major BPS

44.6

-0.3

1.3

39.5

40.5

Major PPT

79.1

0.65

72.9

42.2

Minor 5ss

27.2

-2.6

3.7

36.3

48.1

Minor BPS

35.1

-1.1

2.2

38.98

40.3

Associated Gene:

Gene:

MAFK

Ensembl Gene ID:

ENSAPLG00000015396

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016041

5395400 - 5399087

3688