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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5422928_5423610_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5422928 - 5423610

Intron Length:

683

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGGAGCA

5'SS Class:

major

3'SS Sequence:

TTCATCCTGACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTCAT

U12 Branch Point Sequence:

TTCTCTTCATCC

Flanking Amino Acid:

SKLAPKDYVHCLHKVLFTEQ

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

61.4

37.5

Major BPS

87.4

0.93

0.9

87.9

29.5

Major PPT

73.1

0.52

68.7

37.2

Minor 5ss

29.5

-2.4

3.5

35.7

43.1

Minor BPS

56.8

0.19

1.8

70.17

41.7

Associated Gene:

Gene:

INTS1

Ensembl Gene ID:

ENSAPLG00000014273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014947

5417500 - 5445505

28006