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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5424355_5424897_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5424355 - 5424897

Intron Length:

543

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGACTG

5'SS Class:

strong_major

3'SS Sequence:

TCTCCTCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAG

U12 Branch Point Sequence:

CAGTCGATAACT

Flanking Amino Acid:

VKRAAAVQADDVEVLRVERI

Intron Amino Acid Position:

540

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

68.2

42.8

Major BPS

57.4

0.18

1.7

57.4

49.1

Major PPT

84.9

0.79

0.7

76.7

31.9

Minor 5ss

35.7

-1.6

3.2

45.4

43.6

Minor BPS

48.8

-0

2.3

69.91

46.5

Associated Gene:

Gene:

INTS1

Ensembl Gene ID:

ENSAPLG00000014273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014947

5417500 - 5445505

28006