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Intron Name: Anas_platyrhynchos_platyrhynchos_15_5424995_5425428_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

5424995 - 5425428

Intron Length:

434

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGCTT

5'SS Class:

strong_major

3'SS Sequence:

ATGTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTGAT

U12 Branch Point Sequence:

TATCTGTTGATG

Flanking Amino Acid:

HHPENIQLPPGYQPPNLAIS

Intron Amino Acid Position:

572

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

73.4

43.3

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

80.1

0.68

0.9

73.9

36.1

Minor 5ss

36.2

-1.6

3.5

48.3

47.3

Minor BPS

47.2

-0.3

2.1

55.99

39.8

Associated Gene:

Gene:

INTS1

Ensembl Gene ID:

ENSAPLG00000014273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014947

5417500 - 5445505

28006